CDS

Accession Number TCMCG006C53000
gbkey CDS
Protein Id XP_013728163.1
Location join(1415103..1415386,1415821..1416169,1416243..1416329,1416611..1416732,1416806..1416884,1416955..1417331,1417435..1417483)
Gene LOC106431592
GeneID 106431592
Organism Brassica napus

Protein

Length 448aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013872709.2
Definition cytoplasmic tRNA 2-thiolation protein 2 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category J
Description Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). May act by forming a heterodimer with NCS6 CTU1 that ligates sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko03016        [VIEW IN KEGG]
KEGG_ko ko:K14169        [VIEW IN KEGG]
EC -
KEGG_Pathway ko04122        [VIEW IN KEGG]
map04122        [VIEW IN KEGG]
GOs GO:0002097        [VIEW IN EMBL-EBI]
GO:0002098        [VIEW IN EMBL-EBI]
GO:0002143        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0006139        [VIEW IN EMBL-EBI]
GO:0006396        [VIEW IN EMBL-EBI]
GO:0006399        [VIEW IN EMBL-EBI]
GO:0006400        [VIEW IN EMBL-EBI]
GO:0006725        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0007275        [VIEW IN EMBL-EBI]
GO:0008033        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009451        [VIEW IN EMBL-EBI]
GO:0009653        [VIEW IN EMBL-EBI]
GO:0009791        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010015        [VIEW IN EMBL-EBI]
GO:0010101        [VIEW IN EMBL-EBI]
GO:0010102        [VIEW IN EMBL-EBI]
GO:0010311        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0016070        [VIEW IN EMBL-EBI]
GO:0016740        [VIEW IN EMBL-EBI]
GO:0016782        [VIEW IN EMBL-EBI]
GO:0016783        [VIEW IN EMBL-EBI]
GO:0022622        [VIEW IN EMBL-EBI]
GO:0032501        [VIEW IN EMBL-EBI]
GO:0032502        [VIEW IN EMBL-EBI]
GO:0034227        [VIEW IN EMBL-EBI]
GO:0034470        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034660        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043412        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046483        [VIEW IN EMBL-EBI]
GO:0048364        [VIEW IN EMBL-EBI]
GO:0048527        [VIEW IN EMBL-EBI]
GO:0048528        [VIEW IN EMBL-EBI]
GO:0048646        [VIEW IN EMBL-EBI]
GO:0048731        [VIEW IN EMBL-EBI]
GO:0048856        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0090304        [VIEW IN EMBL-EBI]
GO:0090696        [VIEW IN EMBL-EBI]
GO:0090697        [VIEW IN EMBL-EBI]
GO:0090698        [VIEW IN EMBL-EBI]
GO:0099402        [VIEW IN EMBL-EBI]
GO:1901360        [VIEW IN EMBL-EBI]
GO:1905392        [VIEW IN EMBL-EBI]
GO:1905393        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGGCTTGTAACTCATCTGGCTGCGAGTCCGGTGGTTGCTATGGCCGTGAGAAGGAAAATGGATGCAAGGTGGTTGATGTTAAGGAGACTGTTAGGCTCTGCGTCAAGTGTAAATCCAACGAGCCTATGACGTTCGGTGATGGTGGCTCAGACGATGGGAGATTCTGCGCAGAATGTTTCAGGAGCAATGTCTATGGGAAGTTCCGTCTCGCTGTTACTTCACACGCCATGATCACTCCTTCCGATAACGTCCTTGTTGCCTTCTCCGGCGGTTCGTCTTCCAGGGTTGCTCTTCAGTTCGTGCACGAGCTTCAAGTCAAGGCTTTGAAGAATTACGAGGCGAGTCGTGATAGGTCTTTACCTGTGTTTGGCGTTGGTGTTGCGTTTGTGGATGAGAGTGCAGCTTATCCTGCTCTTTCCGGTGGAATGAGTGATGCTATTGAGTGGGTTCGGTCCACTGTGTTGAGTCTGTCGCCACCTGAAAAGGATCTTCATGTTGTTCCGATCGAGAGTGTGTTTGGTTCGGAGTCTGTTGAAGCACGGGATAGGCTTGTGAAGCTGTTGGACTCTGTTAGTGATGAGACTGGAAAGGAAGATCTTTTGCTGCATCTGAAGATGTTGTCTTTGCAAAAGGTTGCCTCTGAGAATGGGTACAATAGATTAGTGGTTGGATCGTGCACGTCGAGACTCGCTTCCCATGTTCTTACGGCCACTGTCAAGGGACGAGGCTATTCACTATCAGCAGATATTCAGCATGTTGATGCGAGGTGGAAGGTTCCCATTGTGCTTCCACTTCGAGATTGTGTTTGGCAGGAAATAACTAGACTCTGCCATTTGGATGGTCTAAAGACTGTGGAGTTAGCTCGTCATCCACAATCCGGGATCAATGACTTGGTGTCTTCATTTGTCGCTCTCTTGCAGGAAGAGAATCCTTCACGGGAGTGCACAATTGTACGGACAGCTGCAAAGCTTACACCGTTTTACTTCAATAAAATTCCTGAAACGGACGACTCTTGTGTTCCCATGGCCACTCAGAGGCGTCTGAAGAAGTTCAACCTCAAATACGACGGTTCCATGACTACAGAAGCATTCTGCCCTATCTGCAATGGCCCGCTAAATGGATCAGACTCATCTGAAGATGAGTCTGATGCCCTTTATGCTGCTTGCTGTTCAAGTTGCCGGTTTCAGATACTTCCACAAGAGCCATCATCTCTTGACCATTTCGGATCCTTACTACCACATCACATGATCTCCCAAGTGAAGCATCATCAAAAGTTTGACAGCCAAACATATCTGAGGGAGAAGATAAAAGACTGTTTGCTCTTGGACGATGAAGAGGCTGTCTGA
Protein:  
MACNSSGCESGGCYGREKENGCKVVDVKETVRLCVKCKSNEPMTFGDGGSDDGRFCAECFRSNVYGKFRLAVTSHAMITPSDNVLVAFSGGSSSRVALQFVHELQVKALKNYEASRDRSLPVFGVGVAFVDESAAYPALSGGMSDAIEWVRSTVLSLSPPEKDLHVVPIESVFGSESVEARDRLVKLLDSVSDETGKEDLLLHLKMLSLQKVASENGYNRLVVGSCTSRLASHVLTATVKGRGYSLSADIQHVDARWKVPIVLPLRDCVWQEITRLCHLDGLKTVELARHPQSGINDLVSSFVALLQEENPSRECTIVRTAAKLTPFYFNKIPETDDSCVPMATQRRLKKFNLKYDGSMTTEAFCPICNGPLNGSDSSEDESDALYAACCSSCRFQILPQEPSSLDHFGSLLPHHMISQVKHHQKFDSQTYLREKIKDCLLLDDEEAV